Information for 2-TTATACATGG (Motif 18)

C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G C A G T C G T A G A C T C T G A C G T A
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.852
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.9 +/- 26.9bp
Average Position of motif in Background55.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG-----
ANTNNTACATGTANNTN
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG-----
NNTTTTACATGTANNNT
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG-----
ANTATTACATGTANNNN
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG
GAATATTCAT--
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTATACATGG------
TAAATACATGTAAAATT
 A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG-----
ANTTNTACATGTANTTN
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG-----
NNTATTACATGTANNNT
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG
GHATATKCAT--
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTATACATGG
NTTGATACATT-
 A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTATACATGG
TGAATTATGCAT--
 A C G T A C G T A C G T A C G T C G A T A G C T C T G A C G A T G T C A A G T C C G T A A C G T A C T G C T A G
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T