Information for 6-GTCAGACGAGGGC (Motif 15)

A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T A G T C A T C G A G C T A G T C G A C T A T C G T G C A A G T C
p-value:1e-10
log p-value:-2.392e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.0 +/- 19.7bp
Average Position of motif in Background48.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGACGAGGGC--
NNAGGGACAAGGGCNC
 A C G T A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCAGACGAGGGC-
GGTCANYTGAGGWCA
 A C G T A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGACGAGGGC-
GGGNGGGGGCGGGGC
 A C G T A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCAGACGAGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTCAGACGAGGGC------
--NNNAAGGGGGCGGGNNN
 A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCAGACGAGGGC-
---GGGGGCGGGGC
 A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTCAGACGAGGGC-
------CTAGGCCT
 A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGACGAGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCAGACGAGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GTCAGACGAGGGC
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T A C T G A C G T A T G C C G T A C T A G C T G A A T G C A C T G C G T A A C T G A C T G C T A G A G T C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T