Information for 9-CMCATCYCAGCMWGGT (Motif 12)

A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C C G A T A C G T A C T G A G T C A C G T A C T G C T G A A C T G C T G A A C G T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 16.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CMCATCYCAGCMWGGT
----DCTCAGCAGG--
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CMCATCYCAGCMWGGT-
--CCACACAGCAGGAGA
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CMCATCYCAGCMWGGT
-AAATCACAGCA----
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CMCATCYCAGCMWGGT-
--CCACACAGCAGGAGA
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CMCATCYCAGCMWGGT-
-----CACAGCAGGGGG
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CMCATCYCAGCMWGGT
NNNTCCATCCCATAANN--
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CMCATCYCAGCMWGGT-
--GAGCACAGCAGGACA
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CMCATCYCAGCMWGGT
-AAATCACTGC-----
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CMCATCYCAGCMWGGT---
----DCHCAGCAGGRGGCC
 A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CMCATCYCAGCMWGGT
TCCCAGMCRAGCCCC--
 A C G T A G T C G T C A A G T C C G T A A G C T A G T C A G C T A G T C C G T A C T A G A G T C G T C A C G T A A C T G A C T G A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T