p-value: | 1e-16 |
log p-value: | -3.736e+01 |
Information Content per bp: | 1.628 |
Number of Target Sequences with motif | 46.0 |
Percentage of Target Sequences with motif | 5.89% |
Number of Background Sequences with motif | 620.8 |
Percentage of Background Sequences with motif | 1.29% |
Average Position of motif in Targets | 51.2 +/- 24.9bp |
Average Position of motif in Background | 52.1 +/- 29.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAGGTCAGGTCAC TRAGGTCA------ |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGTCAGGTCAC CAAAGGTCAG----- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGGTCAGGTCAC TCAAGGTCAN----- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGGTCAGGTCAC AAGGTCAC----- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGGTCAGGTCAC -AGGTCA------ |
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RORA/MA0071.1/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGTCAGGTCAC ATCAAGGTCA------ |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGTCAGGTCAC TCAAGGTCAT----- |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGGTCAGGTCAC TCTCAAAGGTCACGAG-- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAGGTCAGGTCAC CAAGGHCANV---- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGGTCAGGTCAC TCTCAAAGGTCACCTG-- |
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