Information for 5-WTTTGTCAACAAAGGM (Motif 13)

C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
Reverse Opposite:
A C T G A T G C G T A C C G A T A G C T A C G T C T A G A C G T A C G T C T A G T C G A A T G C G C T A C T G A C T G A G C T A
p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.688
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.6 +/- 27.3bp
Average Position of motif in Background50.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:WTTTGTCAACAAAGGM
-TATGTAAACANG---
 C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-WTTTGTCAACAAAGGM
NCWRWGTAAACANSV--
 A C G T C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:WTTTGTCAACAAAGGM
-TAAGTAAACAAA---
 C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTCAACAAAGGM
AAAAAGTAAACAAAGAC
 A C G T C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTCAACAAAGGM
TAAATGTAAACAAAGGT
 A C G T C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTCAACAAAGGM
TGATTGTTAACAGTTGG
 A C G T C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:WTTTGTCAACAAAGGM
-------AACAAAGG-
 C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTCAACAAAGGM
AAAATGTAAACAAACAG
 A C G T C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTCAACAAAGGM
AAAATGTAAACAAACAG
 A C G T C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WTTTGTCAACAAAGGM
-TATGTAAATAT----
 C G A T A G C T A G C T C A G T A T C G A C G T A G T C C G T A G T C A A G T C G T C A T C G A C G T A A C T G T A C G T G A C
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T