Information for 9-CCTTATTTAC (Motif 9)

A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C
Reverse Opposite:
A T C G A G C T C G T A C T G A G T C A C G A T C T G A C G T A C A T G C T A G
p-value:1e-12
log p-value:-2.802e+01
Information Content per bp:1.841
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif61.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.9 +/- 25.9bp
Average Position of motif in Background51.9 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0015.1_Foxa2_1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATTTAC-----
NNNTTTGTTTACTTTTN
 A C G T A C G T A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CCTTATTTAC-----
BSNTGTTTACWYWGN
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C A C G T A C G T A C G T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCTTATTTAC---
--ATATTTACATA
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCTTATTTAC
NVWTGTTTAC
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCTTATTTAC----
TCCATGTTTACTTTG
 A C G T A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C A C G T A C G T A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXO3/MA0157.2/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCTTATTTAC
--TTGTTTAC
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C
A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTTATTTAC---
--ATATTTACATA
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCTTATTTAC---
-CNTGTTTACATA
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C A C G T A C G T A C G T
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:9
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCTTATTTAC
---TGTTTAC
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C
A C G T A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCTTATTTAC
---TGTTTAC
 A G T C G T A C C G A T A G C T C G T A A C G T A G C T A C G T T C G A A T G C
A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C