Information for 16-CACCTCCCGGTGG (Motif 23)

A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C G T A C A T C G A C T G A C T G C G T A A C T G A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.6 +/- 17.0bp
Average Position of motif in Background53.8 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACCTCCCGGTGG-
CACCCCCGGGGGGG
 A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

ELF4/MA0641.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACCTCCCGGTGG
CACTTCCGGGTT-
 A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACCTCCCGGTGG--
NCCCCCCCGGGGGGN
 A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

ELF1/MA0473.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACCTCCCGGTGG
NACTTCCGGGTT-
 A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACCTCCCGGTGG
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CACCTCCCGGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ELF3/MA0640.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACCTCCCGGTGG
TTACTTCCGGGTT-
 A C G T A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T A C G T

EHF/MA0598.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACCTCCCGGTGG
TACTTCCGGGTT-
 A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
G A C T C T G A A G T C A C G T C A G T A G T C A G T C A C T G A T C G A T C G C G A T C G A T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACCTCCCGGTGG--
ACCCCCCCGGGGGGN
 A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CACCTCCCGGTGG
NNGGCGACACCTCNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A G T C A G T C A T G C A C T G A C T G C G A T A C T G A C T G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T A C G T