Information for 10-TRWTTWGAWMAGC (Motif 17)

A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
Reverse Opposite:
A T C G A T G C A C G T A C G T C G T A C G A T A T G C C G T A C T G A C G T A C G T A A G C T C G T A
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.752
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.7 +/- 30.6bp
Average Position of motif in Background44.7 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0103.1_Meox1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TRWTTWGAWMAGC
GAGGTAATTACCTCAG-
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TRWTTWGAWMAGC
NTTGATTNNATCAN-
 A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TRWTTWGAWMAGC
AAGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TRWTTWGAWMAGC
GGAATAATTACCTCAG-
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TRWTTWGAWMAGC
ACGGTAATTAGCTCAG-
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TRWTTWGAWMAGC
NTGATTAAATTAN-
 A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TRWTTWGAWMAGC
AGGTTAATTAGCTGAT-
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TRWTTWGAWMAGC
GTAATCDGATTA--
 A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TRWTTWGAWMAGC
AAGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TRWTTWGAWMAGC
TAATTAAATTA--
 A C G T C T G A C G A T A C G T A G C T C G A T A T C G C G T A C G A T G T C A C G T A A T C G A T G C
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T