Information for 7-TCAAGACCATGGACAG (Motif 16)

A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A T G C G A C T A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.7 +/- 20.9bp
Average Position of motif in Background11.1 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TCAAGACCATGGACAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TCAAGACCATGGACAG----
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCAAGACCATGGACAG
--AAAACAATGG----
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAAGACCATGGACAG-
--AAGTTCAAGGTCAGC
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCAAGACCATGGACAG
------CCAGGAACAG
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCAAGACCATGGACAG
--ATGACCTTGAA---
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCAAGACCATGGACAG
NTCAAGGTCA-------
 A C G T A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCAAGACCATGGACAG-
-------CAAGGHCANV
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCAAGACCATGGACAG
--VRAACAATGG----
 A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCAAGACCATGGACAG
NNNNATGACCTTGANTN-
 A C G T A C G T A C G T A G T C C G T A C T G A A T C G C G T A G T A C G T A C C G T A C G A T A C T G A C T G G T C A A G T C C G T A C T A G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T