p-value: | 1e-11 |
log p-value: | -2.674e+01 |
Information Content per bp: | 1.879 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 46.7 +/- 15.4bp |
Average Position of motif in Background | 81.5 +/- 0.6bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0006.1_Barhl2/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCAATTGCTTTAAGT NNNTTAATTGGTTTTT-- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | CTCAATTGCTTTAAGT--- ----------TTAAGTGGN |
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PH0009.1_Bsx/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCAATTGCTTTAAGT CAGGTAATTACCTCAG-- |
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Phox2b/MA0681.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTCAATTGCTTTAAGT --TAATTAAATTA--- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | CTCAATTGCTTTAAGT-- ----------TTAAGTGC |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTCAATTGCTTTAAGT CNTTAAGTACTTAANG- |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTCAATTGCTTTAAGT TTTTAAGTACTTAAATT |
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PHOX2A/MA0713.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTCAATTGCTTTAAGT --TAATTAAATTA--- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | CTCAATTGCTTTAAGT--- ----------TTAAGTGGT |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTCAATTGCTTTAAGT TTCAATTGTTCTAAAA |
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