Information for 16-TTATCAGGTCATC (Motif 17)

A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C
Reverse Opposite:
C A T G G C T A C A G T C T A G C G T A A T G C G T A C C G A T A T C G C G T A C G A T C G T A C T G A
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.634
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif230.7
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets47.3 +/- 26.1bp
Average Position of motif in Background50.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTATCAGGTCATC
---TRAGGTCA--
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

BATF3/MA0835.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTATCAGGTCATC-
TGATGACGTCATCA
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C A C G T
G A C T C T A G T C G A C G A T A C T G C G T A G T A C C T A G A C G T G T A C C G T A A G C T G T A C C T G A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTATCAGGTCATC-
CTTATCTCHMCATCT
 A C G T A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTATCAGGTCATC-
--ATGACGTCATCN
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C A C G T
A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TTATCAGGTCATC
-----AGGTCA--
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTATCAGGTCATC-
--ATGACGTCATCN
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C A C G T
A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

ATF7/MA0834.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTATCAGGTCATC-
NGATGACGTCATNN
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C A C G T
A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTATCAGGTCATC
AAAGATGATGTCATC
 A C G T A C G T A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTATCAGGTCATC
AAGATGATGTCAT-
 A C G T A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TTATCAGGTCATC
-----ACGTCATC
 A G C T G C A T C G T A C G A T T A G C G C T A A C T G T A C G G A C T G A T C G T C A C G A T G T A C
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C