Information for 3-AGRCCMGAGGWTW (Motif 4)

C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A G C A T A G T C A G T C A C G T A G T C A C T G A C T G A C T G A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 12.2bp
Average Position of motif in Background76.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGRCCMGAGGWTW
NTGCCCANNGGTNA
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGRCCMGAGGWTW
TAGGGCAAAGGTCA
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGRCCMGAGGWTW---
AAGGCCAGATGGTCCGG
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGRCCMGAGGWTW
WTGSCCTSAGGS--
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGRCCMGAGGWTW
GAGGTCAAAGGTCA
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGRCCMGAGGWTW
--TCCAGATGTT-
 C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGRCCMGAGGWTW
ATGCCCTGAGGC--
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGRCCMGAGGWTW
GTAGGGCAAAGGTCA
 A C G T A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGRCCMGAGGWTW-
ATTGCCTGAGGCAAT
 A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGRCCMGAGGWTW
AGGGGTCAGAGGTCA
 A C G T A C G T C G T A A C T G C T A G A G T C A G T C G T A C A C T G C G T A A C T G A C T G C G T A A C G T C G A T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A