Information for 2-GATCTGACCT (Motif 3)

A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T
Reverse Opposite:
C T G A T C A G A C T G G C A T A T G C T G C A A T C G C T G A C G A T T A G C
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.673
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif640.8
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets49.2 +/- 27.3bp
Average Position of motif in Background48.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:GATCTGACCT--
----TGACCTYA
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GATCTGACCT
----TGACCT
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GATCTGACCT----
----TGACCTTGAT
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GATCTGACCT-
---GTGACCTT
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GATCTGACCT---
---CTGACCTTTG
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GATCTGACCT--
----TGACCYCT
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GATCTGACCT---
---NTGACCTTGA
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GATCTGACCT------
NNNGTGACCTTTGNNN
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GATCTGACCT------
NNNNTGACCTTTNNNN
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GATCTGACCT---
---ATGACCTTGA
 A T C G G C T A G A C T A T G C A C G T T A C G C G T A T G A C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A