Information for 9-ACACACACAG (Motif 23)

T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G
Reverse Opposite:
G T A C G A C T A T C G A C G T T C A G A C G T T A C G C G A T T C A G A C G T
p-value:1e-4
log p-value:-1.118e+01
Information Content per bp:1.691
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif7.16%
Number of Background Sequences with motif1570.1
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets49.0 +/- 25.9bp
Average Position of motif in Background49.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACACACACAG----
AAACAGACAAAGGAAT
A C G T A C G T T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ACACACACAG
----ACAAAG
T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACACACACAG--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACACACACAG-
-----CACAGN
T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACACACACAG----
CGAAGCACACAAAATA
A C G T A C G T T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACACACACAG
AAATAAACA-
T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACACACACAG
GGCCACACCCAN
A C G T A C G T T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACACACACAG
GCCACACCCA-
A C G T T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACACACACAG------
----ACAAAGGNBCCT
T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACACACACAG----
CAAATCCAGACATCACA
A C G T A C G T A C G T T G C A A G T C G C T A A T G C C G T A A G T C G T C A T A G C C T G A C A T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A