Information for 7-STGKGRTGGRTRRGTG (Motif 17)

A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G C T A G T C C G T A A G C T A G T C A G T C C G T A A G T C A G T C G T C A A G T C C G T A A T C G
p-value:1e-6
log p-value:-1.560e+01
Information Content per bp:1.846
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 29.2bp
Average Position of motif in Background32.2 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----STGKGRTGGRTRRGTG
TATTATGGGATGGATAA---
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:STGKGRTGGRTRRGTG---
--GTATTGGGTGGGTAATT
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:STGKGRTGGRTRRGTG
--ATGATKGATGRC--
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:STGKGRTGGRTRRGTG------
-----NTNNTTAAGTGGTTANN
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:STGKGRTGGRTRRGTG
------TGCGTGGGYG
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--STGKGRTGGRTRRGTG
NNHTGTGGTTWN------
 A C G T A C G T A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----STGKGRTGGRTRRGTG
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:STGKGRTGGRTRRGTG-
--GTCATGCHTGRCTGS
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:STGKGRTGGRTRRGTG
-----GTGGAT-----
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:STGKGRTGGRTRRGTG------
-----NTNNTTAAGTGGNTNAN
 A T G C A C G T A C T G A C G T A C T G C T A G A C G T C T A G A C T G T C G A A C G T C T A G C T G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G