Information for 13-AAAGCTAGCTTGT (Motif 30)

G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
Reverse Opposite:
T G C A G T A C C G T A G T C A C A T G T A G C A C G T C T G A A T C G G T A C C G A T A G C T A C G T
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.711
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif71.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets58.2 +/- 29.0bp
Average Position of motif in Background41.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAAGCTAGCTTGT
-AAGCTTG-----
 G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCTAGCTTGT---
CAAAGCTAATTAGNTTN
 A C G T G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTAGCTTGT---
GAAAACTAGTTAACATC
 A C G T G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

GRHL1/MA0647.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAAGCTAGCTTGT
AAAACCGGTTTT-
 G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AAAGCTAGCTTGT
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAAGCTAGCTTGT
-AAACCGGTTT--
 G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AAAGCTAGCTTGT----
AAAGCTAATTAGCGAAA
 G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AAAGCTAGCTTGT
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AAAGCTAGCTTGT
DCYAAAAATAGM----
 A C G T A C G T A C G T G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AAAGCTAGCTTGT
GCTAAAAATAGC----
 A C G T A C G T A C G T G T C A C T G A C G T A A C T G A T G C A G C T C G T A A T C G G A T C C A G T C G A T A C T G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T