Information for 7-AAGCACTCAC (Motif 26)

T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G C G T A T C A G C G A T A C T G A T G C G A C T A C G T
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.842
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif179.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets54.2 +/- 22.4bp
Average Position of motif in Background47.8 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AAGCACTCAC
AAGCACTTAA
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAGCACTCAC-
AGCCACTCAAG
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAGCACTCAC----
AGCGGCACACACGCAA
 A C G T A C G T T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAGCACTCAC
MRSCACTYAA
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAGCACTCAC
AASCACTCAA
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGCACTCAC-
-RSCACTYRAG
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGCACTCAC
--CCAATCAA
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGCACTCAC----
CGAAGCACACAAAATA
 A C G T A C G T T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGCACTCAC
--GCACTTAA
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAGCACTCAC-
-NSCACTYVAV
 T G C A C T G A A T C G A G T C C G T A A G T C A C G T A G T C C G T A G T A C A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G