Information for 10-GTCAAABTGCAGG (Motif 25)

A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T G C C G T A T A C G C G A T A C G T A C G T A C T G C G T A A T G C
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.825
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 17.7bp
Average Position of motif in Background24.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GTCAAABTGCAGG
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAABTGCAGG
BAGTCATANTGAAAG
 A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTCAAABTGCAGG--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAABTGCAGG
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCAAABTGCAGG
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCAAABTGCAGG
GGGGTCAAAGGTCA--
 A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCAAABTGCAGG
GGGGTCAAAGGTCA--
 A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCAAABTGCAGG
GGGGTCAAAGGTCA--
 A C G T A C G T A C G T A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCAAABTGCAGG-
--GAAAGTGAAAGT
 A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCAAABTGCAGG-
--GAAASYGAAASY
 A T C G A C G T A G T C C G T A C G T A C G T A A T G C C G A T A T C G G T A C C G T A C T A G A C T G A C G T
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T