Information for 5-TAAGCAAAGC (Motif 22)

A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C
Reverse Opposite:
A C T G G A T C C G A T A C G T C G A T A C T G A T G C A G C T A C G T T C G A
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.839
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif136.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets53.2 +/- 23.1bp
Average Position of motif in Background47.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAAGCAAAGC
ATATGCAAAT-
 A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCAAAGC
TTATGCAAAT-
 A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TAAGCAAAGC-
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TAAGCAAAGC-
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TAAGCAAAGC
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TAAGCAAAGC--
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAAGCAAAGC
TATGCAAAT-
 A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAAGCAAAGC
TATGCAAAT-
 A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCAAAGC--
ATATGCAAATNNN
 A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAAGCAAAGC-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G A G T C C G T A C G T A C G T A C T A G G T A C A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G