Information for 2-YCAATSTGTA (Motif 18)

G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
Reverse Opposite:
A C G T C G T A A G T C C G T A A T C G C G T A C G A T C A G T A C T G C T G A
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.728
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif177.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets50.8 +/- 24.0bp
Average Position of motif in Background48.7 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--YCAATSTGTA
AGCCAATCGG--
 A C G T A C G T G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------YCAATSTGTA
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YCAATSTGTA
RCCATMTGTT
 G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---YCAATSTGTA--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:YCAATSTGTA
ACCATCTGTT
 G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----YCAATSTGTA----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YCAATSTGTA
GCCATCTGTT
 G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YCAATSTGTA
-CCATATGT-
 G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----YCAATSTGTA-
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YCAATSTGTA
ACCATATGTT
 G A C T A G T C G T C A C G T A C G A T A T G C C G A T A C T G G C A T T G C A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T