Information for 9-GAGHAAGACCAGTTCC (Motif 12)

A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
Reverse Opposite:
C T A G T C A G C G T A C G T A A T G C C G A T C T A G A C T G A C G T A G T C A G C T A C G T C A T G A G T C A C G T A T G C
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.775
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 16.3bp
Average Position of motif in Background60.9 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGHAAGACCAGTTCC
AGGTGHCAGACA------
 A C G T A C G T A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGHAAGACCAGTTCC
VAAACYKGTHWAACMRGTTT-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAGHAAGACCAGTTCC---
-------ACCACATCCTGT
 A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAGHAAGACCAGTTCC
-----AAACCGGTTT-
 A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAGHAAGACCAGTTCC
----AAAACCGGTTTT
 A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PROX1/MA0794.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAGHAAGACCAGTTCC
---CAAGACGCCTTA-
 A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
A C G T A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGHAAGACCAGTTCC
AGGTGNCAGACAG-----
 A C G T A C G T A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GAGHAAGACCAGTTCC
TGACANARRCCAGRC--
 A C G T A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GAGHAAGACCAGTTCC
GAGSCCGAGC------
 A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GAGHAAGACCAGTTCC
TGCGGAGTGGGACTGG----
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G G A T C G T C A C T G A A C T G C G T A A G T C A G T C C G T A A T C G G C A T A C G T A G T C A G T C
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T