Information for 20-GGAGAGGTCG (Motif 32)

A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
Reverse Opposite:
A G T C C T A G C G T A A G T C A G T C A C G T A G T C A C G T A G T C A G T C
p-value:1e-6
log p-value:-1.489e+01
Information Content per bp:1.926
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.6 +/- 14.2bp
Average Position of motif in Background51.3 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGAGGTCG
--AGRGGTCA
 A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGAGGTCG-
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGGTCG-
CAGTGTGGTCGC
 A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGTCG-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGGTCG
ANGNAAAGGTCA
 A C G T A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGAGAGGTCG
NANAAGGGCGTGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGAGAGGTCG
--TRAGGTCA
 A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGGTCG
TTGAGTGSTT-
 A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGTCG----
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGGTCG
GGGGNGGGGC--
 A C G T A C G T A C T G A C T G G T C A A C T G C G T A A C T G A C T G C G A T A G T C A C T G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T