Information for 6-TTGCCCTCTA (Motif 3)

G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
Reverse Opposite:
A C G T C G T A A C T G C G T A A C T G A T C G C T A G A G T C T C G A C T G A
p-value:1e-22
log p-value:-5.264e+01
Information Content per bp:1.838
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.9 +/- 21.1bp
Average Position of motif in Background42.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCCTCTA---
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTCTA
-TGACCYCT-
 G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGCCCTCTA
CTGCCCGCA-
 G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTCTA
-TGACCTYA-
 G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGCCCTCTA
ATGCCCACC-
 G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGCCCTCTA
CNNTTGACCTTTG
 A C G T A C G T A C G T G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGCCCTCTA
CTGACCTTTG
 G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGCCCTCTA---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGCCCTCTA-------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCCTCTA------
NTCNTCCCCTATNNGNN
 A C G T G A C T A C G T A C T G A G T C A T G C G T A C C G A T A G T C A C G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A