Information for 15-AGCCTCSTGCCTGCAM (Motif 27)

C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
Reverse Opposite:
A C G T C G A T T A C G A T G C G T C A A C T G A T C G A G T C G T C A T A C G A T C G G C T A A C T G A C T G A G T C A G C T
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 24.1bp
Average Position of motif in Background36.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCCTCSTGCCTGCAM
--NNACTTGCCTT---
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
-GACACGTGCC-----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
CGGCACGTGCCA----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
-GACACGTGCC-----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTCSTGCCTGCAM
NNGTCGCGTGNCAC---
 A C G T C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
TGGCACGTGCCA----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCCTCSTGCCTGCAM
-NNCGCGTGNN-----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
CGCCTCAGGCA-----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
SNGCACCTGCHS----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCCTCSTGCCTGCAM
-KCCACGTGAC-----
 C T G A A C T G G T A C A G T C C A G T A T G C A T G C A C G T A C T G A T G C G T A C C A G T A T C G A G T C C G T A T G C A
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T