Information for 18-TGCACAGCTCCCC (Motif 23)

A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
Reverse Opposite:
A T C G C T A G A C T G T C A G C G T A A C T G A G T C A C G T A C T G G A C T A T C G A T G C C G T A
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.0 +/- 21.2bp
Average Position of motif in Background45.4 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TGCACAGCTCCCC
------GCTCCG-
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:TGCACAGCTCCCC-
--------TCCCCA
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCACAGCTCCCC---
CTCAGCAGCTGCTACTG
 A C G T A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCACAGCTCCCC
--CACAGN-----
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCACAGCTCCCC
--GACAGCTGCAG
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCACAGCTCCCC
--AACAGCTGCAG
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCACAGCTCCCC
--AACAGCTG---
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCACAGCTCCCC
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCACAGCTCCCC
-NNACAGCTGC--
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCACAGCTCCCC-
--AGCAGCTGCTNN
 A C G T A T C G A T G C C T G A A G T C G T C A C T A G A G T C A C G T A G T C A G T C A G T C A T G C A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C