Information for 10-GACATATCRA (Motif 15)

A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
Reverse Opposite:
A C G T A G C T T A C G C G T A A C G T C G T A C G A T A T C G A C G T A T G C
p-value:1e-11
log p-value:-2.733e+01
Information Content per bp:1.819
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.8 +/- 29.9bp
Average Position of motif in Background65.0 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GACATATCRA---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GACATATCRA
-ACATATGG-
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GACATATCRA
NACATATGGN
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Neurog1/MA0623.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACATATCRA
ACCATATGGT
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GACATATCRA
GACATATGTT
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GACATATCRA-
-GHATATKCAT
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACATATCRA
AACATATGTT
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GACATATCRA---
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACATATCRA
GCCATATGGT
 A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACATATCRA----
ACCCGTATCAAATTT
 A C G T A T C G C G T A A T G C C G T A A C G T C G T A A C G T A T G C T C A G C G T A A C G T A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T