Information for 7-TGGTCTGACTGAA (Motif 10)

C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
Reverse Opposite:
G C A T A C G T A T G C C G T A A T C G C A G T T A G C C G T A C T A G T C G A A T G C G T A C C G T A
p-value:1e-7
log p-value:-1.833e+01
Information Content per bp:1.654
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif163.0
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets55.6 +/- 24.8bp
Average Position of motif in Background49.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCTGACTGAA
GTGGCGTGACNG--
 A C G T C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGTCTGACTGAA
TWGTCTGV-----
 C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGGTCTGACTGAA
-----TGACTCA-
 C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGTCTGACTGAA
ATGGGGTGAT----
 A C G T C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCTGACTGAA
ATGGGGTGAT----
 A C G T C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGTCTGACTGAA
-GGTCTGGCAT--
 C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGTCTGACTGAA
-TGTCTGDCACCT
 C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGTCTGACTGAA
-GAAATGACTCA-
 C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGTCTGACTGAA
CTGTCTGG-----
 C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGTCTGACTGAA
VBSYGTCTGG-----
 A C G T A C G T C G A T A C T G T A C G A C G T G A T C C G A T A T C G G T C A A T G C G C A T A T C G T C G A C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T