Information for 4-GRGGGCGCCSTBYGCV (Motif 3)

C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
Reverse Opposite:
A T G C A T C G A T G C T C A G T C A G T C G A A T G C C T A G T A C G A T G C A C T G A T G C A G T C T G A C A G T C A G T C
p-value:1e-16
log p-value:-3.760e+01
Information Content per bp:1.638
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif89.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets49.2 +/- 17.9bp
Average Position of motif in Background46.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GRGGGCGCCSTBYGCV
TTGGGGGCGCCCCTAG--
 A C G T A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GRGGGCGCCSTBYGCV
---GGCGCGCT-----
 C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GRGGGCGCCSTBYGCV
NNNAAGGGGGCGGGNNN----
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GRGGGCGCCSTBYGCV
GCCASCAGGGGGCGCYVNNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GRGGGCGCCSTBYGCV
ANTGCGGGGGCGGN-------
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GRGGGCGCCSTBYGCV
NNAGGGGCGGGGTNNA--
 A C G T A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GRGGGCGCCSTBYGCV
GGGGGCGGGGCC----
 C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GRGGGCGCCSTBYGCV
RGKGGGCGKGGC-----
 A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GRGGGCGCCSTBYGCV
AGGGGGCGGGGCTG---
 A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GRGGGCGCCSTBYGCV
AAGGGGGCGTGGCC----
 A C G T A C G T C T A G C T A G A C T G C T A G A T C G T G A C A T C G A G T C A G T C T A C G A G C T A G T C A G T C T A C G A T G C T A C G
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T A C G T A C G T A C G T