Information for 3-TGCCMCCTRGCTGTCC (Motif 2)

A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
Reverse Opposite:
C A T G A C T G C G T A A G T C C G T A A C T G T G A C A G T C C T G A A C T G A C T G A C G T A C T G A T C G G T A C C T G A
p-value:1e-18
log p-value:-4.295e+01
Information Content per bp:1.809
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 23.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCCMCCTRGCTGTCC
CGCCCCCTGACA----
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCCMCCTRGCTGTCC-----
----NNNCAGCTGTCAATATN
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:TGCCMCCTRGCTGTCC-
---------GCTGTCAA
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCCMCCTRGCTGTCC----
----AACTAGCTGTCAATAC
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCCMCCTRGCTGTCC
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCCMCCTRGCTGTCC
-GACCCCCCGCTGTG-
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TGCCMCCTRGCTGTCC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGCCMCCTRGCTGTCC
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:TGCCMCCTRGCTGTCC-
---------CCTGTCAA
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCCMCCTRGCTGTCC
-NNCACCTGNN-----
 A G C T A C T G A T G C A G T C G T C A A G T C A G T C A G C T C T A G A C T G A G T C A C G T C T A G A C G T A G T C G T A C
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T