Information for 10-GGACACGGTTCGC (Motif 10)

C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
Reverse Opposite:
T A C G G T A C A C T G G T C A G C T A T A G C A G T C A C T G A C G T A T C G G A C T A G T C A G T C
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.685
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif25.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.6 +/- 28.1bp
Average Position of motif in Background54.4 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGACACGGTTCGC
AAGGTCAC-------
 A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGACACGGTTCGC
CTACTTGGATACGGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGACACGGTTCGC---
NGTCACGCTTGGCTGC
 C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGACACGGTTCGC
TRAGGTCA--------
 A C G T A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GGACACGGTTCGC
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGACACGGTTCGC
--TGTCGGTT---
 C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGACACGGTTCGC
AGGTCA--------
 A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGACACGGTTCGC
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGACACGGTTCGC
NGTGGGCAT-------
 A C G T A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGACACGGTTCGC
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A A T G C C G T A G T A C A C T G A T C G C G A T A C G T T A G C C A T G A T G C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T