Information for 16-TGGTAAAAGATCT (Motif 17)

A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 6.9bp
Average Position of motif in Background27.7 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rxra/MA0512.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGTAAAAGATCT
GGGGTCAAAGGTCA
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGTAAAAGATCT
GGGGTCAAAGGTCA
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGTAAAAGATCT
GGGGTCAAAGGTCA
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGTAAAAGATCT
GGTCGTAAAAA----
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGTAAAAGATCT
GAGGTCAAAGGTCA
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGTAAAAGATCT
GTCGTAAAAA----
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGTAAAAGATCT
GCTCGTAAAAA----
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGTAAAAGATCT
GGTCGTAAAAT----
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGTAAAAGATCT
AGTCGTAAAAA----
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGGTAAAAGATCT
TAAAGTCGTAAAATAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G A C G T A C G T