Information for 7-GCAAGGCGGC (Motif 11)

A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C
Reverse Opposite:
A C T G A G T C T A G C A C T G A G T C A G T C A C G T C G A T A C T G A G T C
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.816
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif390.9
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets42.8 +/- 28.1bp
Average Position of motif in Background50.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCAAGGCGGC-
TGTCAGGGGGCG
 A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCAAGGCGGC-
KGTTGCTAGGMAACA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGGCGGC------
NNNAAGGGGGCGGGNNN
 A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAAGGCGGC
GCTCGGSCTC
 A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAAGGCGGC------
AGCTCGGCGCCAAAAGC
 A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAGGCGGC-
-CAAGGHCANV
 A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGGCGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGGCGGC-
TGCCCNGGGGCA
 A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCAAGGCGGC
AAGGCAAGTGT--
 A C G T A C G T A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAAGGCGGC------
CCTTCGGCGCCAAAAGG
 A C G T A C T G A G T C C G T A G T C A A C T G A C T G T G A C A T C G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G