Information for 4-TAATAAACCT (Motif 7)

A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
Reverse Opposite:
C G T A T C A G C T A G G A C T A G C T A C G T G T C A G C A T G C A T T C G A
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.680
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.79%
Number of Background Sequences with motif407.0
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets52.0 +/- 30.3bp
Average Position of motif in Background50.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX1/MA0878.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAATAAACCT
GCAATAAAA--
 A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAATAAACCT
NGYCATAAAWCH
 A C G T A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TAATAAACCT-
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TAATAAACCT
GGTAATAAAAA-
 A C G T A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TAATAAACCT
GTCATAAAAN-
 A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TAATAAACCT
CCAATAAAAA-
 A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAATAAACCT
NCYAATAAAA--
 A C G T A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TAATAAACCT---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TAATAAACCT--
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TAATAAACCT
CCAATAAAAA-
 A C G T A G C T C G T A C G T A C A G T G T C A C T G A C T G A G A T C A G T C C G A T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T