Information for 12-GGACCTGGTTTTG (Motif 13)

A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C T G A C G T A A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.154e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 32.9bp
Average Position of motif in Background45.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGACCTGGTTTTG
TTGACCTANTTATN
 A C G T A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGACCTGGTTTTG
-AAACCGGTTT--
 A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGACCTGGTTTTG
TGACCTARTT---
 A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGACCTGGTTTTG
TGACCTTGAT---
 A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGACCTGGTTTTG
NAAACCGGTTTT-
 A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGACCTGGTTTTG
CGCACCTGCT----
 A C G T A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGACCTGGTTTTG------
----NTGGTTTCGGTTNNN
 A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGACCTGGTTTTG-----
-NNNTTGGTTTCGNTNNN
 A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGACCTGGTTTTG
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGACCTGGTTTTG
RYHYACCTGB-----
 A C G T A C G T A C T G A C T G T G C A A G T C A G T C A C G T A C T G C T A G A C G T A G C T A C G T A C G T A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T