Information for 10-GGACGTGCAT (Motif 12)

A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
Reverse Opposite:
G T C A A C G T A C T G A G T C G T C A A G T C C A T G A G C T G T A C A T G C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.772
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 19.8bp
Average Position of motif in Background40.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGCAT
GGGTACGTGC--
 A C G T A C G T A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGACGTGCAT
GGACGTGC--
 A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGACGTGCAT
RTACGTGC--
 A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGACGTGCAT
-TACGTGCV-
 A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGACGTGCAT
AGAGGAAGTG---
 A C G T A C G T A C G T A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGACGTGCAT
ACAGGAAGTG---
 A C G T A C G T A C G T A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGACGTGCAT-
CGGAAGTGAAAC
 A C G T A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

ETV6/MA0645.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGACGTGCAT
AGCGGAAGTG---
 A C G T A C G T A C G T A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGACGTGCAT
KCACGTGMCN
 A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGACGTGCAT--
GGAAGTGAAAST
 A T C G A C T G C T G A G T A C C T A G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T