Information for 1-ACTGCCAACT (Motif 4)

C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
Reverse Opposite:
G C T A A C T G C A G T C A G T A C T G A C T G A T G C G C T A A T C G G C A T
p-value:1e-13
log p-value:-3.195e+01
Information Content per bp:1.660
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif17.05%
Number of Background Sequences with motif3766.9
Percentage of Background Sequences with motif8.32%
Average Position of motif in Targets53.0 +/- 24.7bp
Average Position of motif in Background50.1 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-ATGCCAACC
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ACTGCCAACT
GGTGCCAAGT
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-TTGCCAAG-
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ACTGCCAACT
CGTGCCAAG-
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ACTGCCAACT
--TGCCAA--
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACTGCCAACT
CCAACTGCCA---
 A C G T A C G T A C G T C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ACTGCCAACT
--TGTCANYT
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACTGCCAACT----
ACTATGCCAACCTACC
 A C G T A C G T C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ACTGCCAACT
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-ATGCCCACC
 C G T A T A G C C G A T T A C G T G A C T G A C G T C A G T C A T G A C C G A T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C