Information for 9-GTATGCATGT (Motif 23)

C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T
Reverse Opposite:
T C G A A G T C C T G A C A G T T A C G A G T C G T C A A G C T T G C A A G T C
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.673
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif1346.8
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets48.9 +/- 24.7bp
Average Position of motif in Background47.7 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTATGCATGT--
-AAGGCAAGTGT
 C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTATGCATGT----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTATGCATGT--
----GCACGTAY
 C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTATGCATGT------
AAAATACATGTAATACT
 A C G T C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTATGCATGT
GHATATKCAT--
 A C G T A C G T C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTATGCATGT------
TAAATACATGTAAAATT
 A C G T C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTATGCATGT------
AATATACATGTAATATA
 A C G T C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTATGCATGT------
AATATACATGTAAAATT
 A C G T C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTATGCATGT
---TGCGTG-
 C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTATGCATGT--
--TTGCGTGCVA
 C T A G A C G T T C G A C A G T C T A G A T G C G T C A G A C T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A