p-value: | 1e-7 |
log p-value: | -1.780e+01 |
Information Content per bp: | 1.741 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.48% |
Number of Background Sequences with motif | 65.9 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 57.3 +/- 23.6bp |
Average Position of motif in Background | 55.5 +/- 38.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.09 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.82 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | MTCWCWGCAGGSA- --CACAGCAGGGGG |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 2 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -MTCWCWGCAGGSA- CCACACAGCAGGAGA |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 3 |
Score: | 0.79 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MTCWCWGCAGGSA -DCTCAGCAGG-- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MTCWCWGCAGGSA--- -DCHCAGCAGGRGGCC |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 5 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -MTCWCWGCAGGSA- CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 6 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -MTCWCWGCAGGSA- GAGCACAGCAGGACA |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---MTCWCWGCAGGSA- AATCGCACTGCATTCCG |
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Gfi1b/MA0483.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --MTCWCWGCAGGSA AAATCACAGCA---- |
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Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --MTCWCWGCAGGSA AAATCACTGC----- |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | MTCWCWGCAGGSA ----CAGCTGNT- |
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