Information for 4-CCACTGTACT (Motif 10)

A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
Reverse Opposite:
C G T A T A C G C G A T G C T A G T A C G C T A A C T G G A C T C T A G T C A G
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.662
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif12.08%
Number of Background Sequences with motif2557.6
Percentage of Background Sequences with motif5.65%
Average Position of motif in Targets47.0 +/- 27.1bp
Average Position of motif in Background49.3 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCACTGTACT---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCACTGTACT-
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C G T A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCACTGTACT
NCCATTGTTC-
 A C G T A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCACTGTACT
CCATTGTTYB
 A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCACTGTACT
CCATTGTTTT
 A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCACTGTACT---
---CTGTTCCTGG
 A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACTGTACT
ATCCAC------
 A C G T A C G T A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCACTGTACT
CCATTGTTC-
 A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCACTGTACT
NSCACTYVAV-
 A C G T A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCACTGTACT-
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C G A T C C T G A T G A C C G A T C A T G C G A T G C T A A T G C G C A T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T