Information for 6-CTCTTGTGGC (Motif 5)

G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C C G T A G A T C G C T A C G T A C T A G T G C A A C T G
p-value:1e-18
log p-value:-4.260e+01
Information Content per bp:1.834
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.36%
Number of Background Sequences with motif296.4
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets40.8 +/- 25.5bp
Average Position of motif in Background46.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTCTTGTGGC
RTCATGTGAC
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------CTCTTGTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------CTCTTGTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCTTGTGGC---
-NNHTGTGGTTWN
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCTTGTGGC--
-GTCTGTGGTTT
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-10
Orientation:forward strand
Alignment:----------CTCTTGTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCTTGTGGC---
----NTTGGCANN
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTCTTGTGGC-
-----TTGGCA
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCTTGTGGC--
-TTTTATGGCTN
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCTTGTGGC-
GTCATGTGACC
 G T A C A C G T A G T C C G A T C G A T C T A G C G A T A C T G A C T G A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C