Information for 4-GRAACAGTGACTCACA (Motif 10)

A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
Reverse Opposite:
C G A T A T C G C G A T C T A G C G T A T A C G C A G T A T G C C G T A G T A C A C G T A T C G A G C T A C G T A G T C T A G C
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.708
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.9 +/- 31.2bp
Average Position of motif in Background52.6 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GRAACAGTGACTCACA
NANTGGAAAAANTGAGTCAN-
 A C G T A C G T A C G T A C G T A C G T A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GRAACAGTGACTCACA
TGGAACAGMA-------
 A C G T A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GRAACAGTGACTCACA
CCAGGAACAG---------
 A C G T A C G T A C G T A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GRAACAGTGACTCACA
-NAACAAT--------
 A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GRAACAGTGACTCACA
TGACCCAGTGACCTAC-
 A C G T A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GRAACAGTGACTCACA
--AACAAT--------
 A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GRAACAGTGACTCACA
GTAAACAG---------
 A C G T A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GRAACAGTGACTCACA
AATGAACAATGGAATT--
 A C G T A C G T A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GRAACAGTGACTCACA
GGAACAAAGR------
 A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GRAACAGTGACTCACA
--AACCGANA------
 A T C G T C A G C G T A C T G A A T G C C G T A A C T G C G A T A T C G G C T A A G T C G C A T G A T C C G T A A T G C G C T A
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T