Information for 2-TGACCCTGTCCCT (Motif 2)

A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
Reverse Opposite:
C T G A C T A G A C T G A C T G G C T A A G T C G T C A A C T G A C T G A C T G A C G T A G T C C G T A
p-value:1e-17
log p-value:-3.977e+01
Information Content per bp:1.877
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 29.3bp
Average Position of motif in Background48.0 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGACCCTGTCCCT
TGACCTTGACCT-
 A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCTGTCCCT
NNNNTGACCCGGCGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACCCTGTCCCT--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGACCCTGTCCCT
TGACCTTGACCT-
 A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACCCTGTCCCT
TGACCT-------
 A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGACCCTGTCCCT
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACCCTGTCCCT-
TGACCTTTGCCCTA
 A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCTGTCCCT
NNCNTGACCCCGCTCT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGACCCTGTCCCT
NTGACCTTGA----
 A C G T A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCCTGTCCCT
TGACCTTGAV---
 A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C T G C A G T A G T C A G T C A G T C A G C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T