Information for 12-CAGCTCAAAA (Motif 15)

A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A
Reverse Opposite:
A G C T A G C T C G A T A C G T A C T G C G T A T A C G A G T C G A C T A C T G
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.789
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif257.3
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets46.2 +/- 21.6bp
Average Position of motif in Background52.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCAAAA----
CGAAGCACACAAAATA
 A C G T A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGCTCAAAA------
AAGGTCAAAAGGTCAA
 A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGCTCAAAA-
-ACATCAAAGG
 A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGCTCAAAA-----
AAAGGTCAAAAGGTCA
 A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCTCAAAA---
-ACATCAAAGGNA
 A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCAAAA-----
TATAGATCAAAGGAAAA
 A C G T A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCAAAA-----
NANAGATCAAAGGGNNN
 A C G T A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCTCAAAA---
AAAGATCAAAGGAA
 A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCAAAA-----
TATAGATCAAAGGAAAA
 A C G T A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCAAAA-----
NNNAGATCAAAGGANNN
 A C G T A C G T A G T C C T G A C T A G A T G C C G A T T G A C G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T