Information for 10-ACAAATATTT (Motif 12)

G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G A T T G C A A C G T G C A T A C G T T C A G C G A T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.726
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif392.0
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets37.7 +/- 28.2bp
Average Position of motif in Background48.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTT-
NNTNNCAATATTAG
 A C G T A C G T A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTT-
NNTNNCAATATTAG
 A C G T A C G T A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACAAATATTT
AAACAAACATTC
 A C G T A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACAAATATTT
AAATAAACA---
 A C G T A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAAATATTT
AATAAACAATN
 A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACAAATATTT
TATGTAAATAT--
 A C G T A C G T A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAAATATTT
GTAAACA---
 G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAAATATTT
GTAAACA---
 G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACAAATATTT
--AATTATT-
 G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACAAATATTT
TATGTAAATAT--
 A C G T A C G T A C G T G C T A A G T C G T C A C G T A C G T A A C G T C G T A A C G T C G A T C G A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T