Information for 10-AGCAGCCTCG (Motif 17)

G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
Reverse Opposite:
A G T C A C T G C T G A A C T G A T C G A G T C A C G T A T C G T G A C A C G T
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.846
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif141.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets47.8 +/- 26.7bp
Average Position of motif in Background54.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCCTCG--
AGCAACAGCCGCACC
 A C G T A C G T A C G T G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCAGCCTCG
--CAGCC---
 G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCAGCCTCG
-BCAGACWA-
 G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCAGCCTCG
CGCAGCTGCG
 G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGCAGCCTCG
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCCTCG
YAACBGCC---
 A C G T G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCAGCCTCG
--AGGCCTAG
 G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCAGCCTCG
-TCAGTCTT-
 G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCCTCG
AGCAGCTGCTNN-
 A C G T A C G T A C G T G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGCCTCG--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A T G C T G C A A C T G A T G C A G T C G A C T G T A C C T A G A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A