Information for 8-CAAGCTTGTT (Motif 16)

T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T
Reverse Opposite:
G T C A C G T A G T A C G C T A C G T A C A T G G A T C G A C T C A G T A T C G
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.598
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif911.4
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets44.6 +/- 26.6bp
Average Position of motif in Background50.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CAAGCTTGTT
CAAGCTT---
 T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAAGCTTGTT
----ATTGTT
 T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAAGCTTGTT-
----ATTGTTA
 T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAAGCTTGTT---
----ATTGTTTAN
 T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGCTTGTT------
GAAAACTAGTTAACATC
 A C G T T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAGCTTGTT-----
-AAAATTGTTATGAA
 T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAAGCTTGTT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAGCTTGTT
CCAGCTGTTN
 T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCTTGTT-----
AANTTATTGTTCTNNA
 A C G T T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAAGCTTGTT---
CTAATATTGCTAAA
 A C G T T A G C G T C A C T G A C T A G G T A C G C A T C G A T C A T G G C A T C A G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A