Information for 6-GCTATCAGAG (Motif 13)

C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G A T A C T G C G T A A G C T C G T A T C A G G A T C
p-value:1e-10
log p-value:-2.387e+01
Information Content per bp:1.866
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.7 +/- 23.9bp
Average Position of motif in Background53.4 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA5/MA0766.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTATCAGAG
TCTTATCT---
 A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTATCAGAG--
ACCCGTATCAAATTT
 A C G T A C G T A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGAG--
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTATCAGAG
CCAATCAA--
 C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTATCAGAG
YSTTATCT---
 A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGAG--
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTATCAGAG-
-AAATCACTGC
 C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCTATCAGAG--
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PB0127.1_Gata6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGAG--
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTATCAGAG--
-AAATCACAGCA
 C T A G A G T C C G A T T C G A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A