Information for 5-AGSTTCCAGAMRGGCC (Motif 6)

C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
Reverse Opposite:
A C T G A C T G A G T C A T G C A G T C A C T G A C G T A G T C C A G T C T A G A C T G G T C A C T G A A T C G A T G C A G C T
p-value:1e-11
log p-value:-2.577e+01
Information Content per bp:1.732
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 18.1bp
Average Position of motif in Background41.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGSTTCCAGAMRGGCC
AGGTGNCAGACAG---
 C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGSTTCCAGAMRGGCC--
---TCCCAGMCRAGCCCC
 C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGSTTCCAGAMRGGCC
-----CCAGACRSVB-
 C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGSTTCCAGAMRGGCC
-----CCAGACAG---
 C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGSTTCCAGAMRGGCC
BCNGGTTCTAGANCN---
 A C G T A C G T C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGSTTCCAGAMRGGCC
GAANGTTCTAGAA-----
 A C G T A C G T C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGSTTCCAGAMRGGCC
GAANNTTCTAGAA-----
 A C G T A C G T C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGSTTCCAGAMRGGCC
TAGAANVTTCTAGAA-----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------AGSTTCCAGAMRGGCC
TTCTAGAANNTTCCAGAANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGSTTCCAGAMRGGCC-
CAAATCCAGACATCACA
 C T G A A T C G A T G C A G C T A C G T A G T C A G T C G C T A C T A G G T C A G T A C C T A G A T C G A C T G G T A C T G A C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A