Information for 18-GGCTCMGGGATTT (Motif 28)

A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T
Reverse Opposite:
G T C A C G T A T C G A A C G T A G T C T G A C A G T C C A T G C T A G C T G A C A T G A T G C T A G C
p-value:1e-5
log p-value:-1.352e+01
Information Content per bp:1.698
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif115.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets55.7 +/- 25.5bp
Average Position of motif in Background45.0 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGCTCMGGGATTT-
----CNGTGATTTN
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0162.1_Sfpi1_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCMGGGATTT-
GGTTCCNNAATTTG
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T A C G T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGCTCMGGGATTT
-----NGGGATTA
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGCTCMGGGATTT--
-----VRGGATTARN
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGCTCMGGGATTT--
------GGGATTANN
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTCMGGGATTT
GGCTCYAKCAYC-
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGCTCMGGGATTT-
------GGGATTAA
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCTCMGGGATTT------
--TGAAGGGATTAATCATC
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCTCMGGGATTT
---GCAGTGATTT
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCTCMGGGATTT
-GCTCCG------
 A T C G A T C G G A T C A G C T A G T C G T A C T C A G A C T G A C T G C G T A A G C T G A C T A C G T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T