Information for 3-TVACATATCABGC (Motif 2)

A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C
Reverse Opposite:
A C T G A G T C T A G C A C G T A C T G G T C A A C G T C G T A A C G T A C T G A G C T A C G T C G T A
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.7 +/- 22.7bp
Average Position of motif in Background75.7 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TVACATATCABGC-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TVACATATCABGC--
GAGCACAGCAGGACA
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TVACATATCABGC--
-----TBGCACGCAA
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TVACATATCABGC--
CCACACAGCAGGAGA
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TVACATATCABGC-
--------CACGCA
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TVACATATCABGC--
CCACACAGCAGGAGA
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TVACATATCABGC
--ACATTCCA---
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TVACATATCABGC
TATTACGTAACA---
 A C G T A C G T A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TVACATATCABGC
ATTTGCATA------
 A C G T A C G T A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TVACATATCABGC
AACCTTATAT---
 A C G T T C G A C T G A A G T C C G T A A C G T C G T A A C G T A G T C C G T A A T C G A C T G A G T C
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T